gganatogram Sep 9, 2018 gganatogram https://github.com/jespermaag/gganatogram Create anatogram images for different organisms. For now only human male is available. . The idea for this package came to me after seeing a twitter post for... [read more]
Single cell RNA-seq (ES mouse) using Seurat Mar 25, 2018 In this post I will analyze mouse ES-cell single cell RNA-seq data using Seurat. Data was downlaoded from https://github.com/debsin/dropClust library(RCurl) library(Seurat) library(cellrangerRkit) library(data.table) library(tidyverse) This post also follows examples from... [read more]
World bank health data Mar 18, 2018 library(data.table) library(tidyverse) Data has been downloaded and is called data.csv. https://www.kaggle.com/theworldbank/health-nutrition-and-population-statistics/data data <- fread('~/Downloads/data.csv', fill=T, stringsAsFactors=F) dim(data) ## [1] 89010 61 head(data) ## Country Name Country Code ## 1: Arab... [read more]
Bayesian regression of heart data Mar 17, 2018 This post tries to use Bayesian linear regression to explore causes of heart disease. Bayesian linear regression library("corrplot") library(ncvreg) library(ipred) library(dplyr) library(ggplot2) library(RColorBrewer) #data(dystrophy) data(heart) dim(heart) ## [1] 462 10... [read more]
New york census data Mar 17, 2018 Plotting New York city neighbourhoods This blog plots the percentage of low-income housholds in each census are of NYC. Low-income households are defined as households with an income of less... [read more]
Sweden election 2014 Mar 17, 2018 Plotting the Swedish Election 2014 This post plots the results from the 2014 Swedish general election for each political party per county. The values plotted are votes as z-value for... [read more]
